Publications :
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Pourcel C, Salvignol G, Vergnaud G. |
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CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage
DNA, and provide additional tools for evolutionary studies.
Microbiology. 2005 Mar;151(Pt 3):653-63 |
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Ramisse
V, Houssu P, Hernandez E, Denoeud F, Hilaire V, Lisanti O, Ramisse F,
Cavallo JD, Vergnaud G. |
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Variable number of tandem repeats in Salmonella
enterica subsp. enterica for typing purposes.
J Clin Microbiol. 2004 Dec;42(12):5722-30. |
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Lespinasse
J, Testard H, Nugues F, Till M, Cordier MP, Althuser M, Amblard F,
Fert-Ferrer S, Durand C, Dalmon F, Pourcel C, Jouk PS. |
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A submicroscopic unbalanced subtelomeric translocation
t(2p;10q) identified by fluorescence in situ hybridization: fetus with
increased nuchal translucency and normal standard karyotype with later
growth and developmental delay, rhombencephalosynapsis (RES).
Ann Genet. 2004 Oct-Dec;47(4):405-17. |
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Fabre
M, Koeck JL, Le Fleche P, Simon F, Herve V, Vergnaud G, Pourcel C. |
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High genetic diversity revealed by variable-number tandem
repeat genotyping and analysis of hsp65 gene polymorphism in a large
collection of "Mycobacterium canettii" strains
indicates that the M. tuberculosis complex is a recently emerged
clone of "M. canettii".
J Clin Microbiol. 2004 Jul;42(7):3248-55. |
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Denoeud
F, Vergnaud G.
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Identification of polymorphic tandem repeats by direct
comparison of genome sequence from different bacterial strains : a
web-based resource.
BMC Bioinformatics. 2004 Jan 12;5(1):4.
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DNA-DNA hybridization study of
Burkholderia species using genomic DNA macro-array analysis coupled to reverse
genome probing.
Int J Syst Evol Microbiol. 2003 May;53(Pt 3):739-46.
Characterization of a tandem
repeat polymorphism in Legionella pneumophila and its use for genotyping.
J Clin Microbiol. 2003 May;41(5):1819-26.
Predicting human minisatellite
polymorphism.
Genome Res. 2003 May;13(5):856-67. Epub 2003 Apr 14.
Segmental
polymorphisms in the proterminal regions of a subset of human chromosomes.
Genome Res. 2002 Nov;12(11):1673-8.
High
resolution, on-line identification of strains from the Mycobacterium
tuberculosis complex based on tandem repeat typing.
BMC Microbiol. 2002 Nov 27;2(1):37.
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Le
Fleche P, Hauck Y, Onteniente L, Prieur A, Denoeud F, Ramisse V, Sylvestre P,
Benson G, Ramisse F, Vergnaud G.
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Free in PMC ,
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A tandem
repeats database for bacterial genomes: application to the genotyping of
Yersinia pestis and Bacillus anthracis.
BMC Microbiol. 2001;1(1):2.
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Giraudeau F, Taine L, Biancalana V,
Delobel B, Journel H, Missirian C, Lacombe D, Bonneau D, Parent P, Aubert D,
Hauck Y, Croquette MF, Toutain A, Mattei MG, Loiseau HA, David A, Vergnaud G.
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Use of a set
of highly polymorphic minisatellite probes for the identification of cryptic
1p36.3 deletions in a large collection of patients with idiopathic mental
retardation.
J Med Genet. 2001 Feb;38(2):121-5
PMID: 11288712
A dominant
modifier of transgene methylation is mapped by qtl analysis to mouse chromosome
13.
Genome Res. 2001 Mar;11(3):382-8.
PMID: 11230162
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Livshits LA, Malyarchuk SG,
Kravchenko SA, Matsuka GH, Lukyanova EM, Antipkin YG, Arabskaya LP, Petit E,
Giraudeau F, Gourmelon P, Vergnaud G, Le Guen B.
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Children of
Chernobyl Cleanup Workers do not Show Elevated Rates of Mutations in
Minisatellite Alleles.
Radiat Res. 2001 Jul;155(1):74-80.
PMID: 11121218
Minisatellites:
mutability and genome architecture.
Genome Res. 2000 Jul;10(7):899-907. Review.
Structure
and evolution of human sub-telomeric regions.
J Soc Biol. 1999;193(1):35-40. Review. French.
The SH2D2A
gene encoding the T-cell-specific adapter protein (TSAd) is localized
centromeric to the CD1 gene cluster on human Chromosome 1.
Immunogenetics. 2000 Mar;51(3):179-85.
Meiotic
instability of human minisatellite CEB1 in yeast requires DNA double-strand
breaks.
Nat Genet. 1999 Nov;23(3):367-71.
Finding new
human minisatellite sequences in the vicinity of long CA-rich sequences.
Genome Res. 1999 Jul;9(7):647-53.
Linkage and
physical mapping of rat microsatellites derived from minisatellite loci.
Mamm Genome. 1999 Apr;10(4):405-9.
A
polymorphic porcine dinucleotide repeat S0559 (BHT0107) at chromosome 6q28-q31.
Anim Genet. 1998 Dec;29(6):460.
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Amarger V, Gauguier D, Yerle M, Apiou F,
Pinton P, Giraudeau F, Monfouilloux S, Lathrop M, Dutrillaux B, Buard J,
Vergnaud G.
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Analysis of
distribution in the human, pig, and rat genomes points toward a general
subtelomeric origin of minisatellite structures.
Genomics. 1998 Aug
15;52(1):62-71.
Recent
human-specific spreading of a subtelomeric domain.
Genomics. 1998 Jul 15;51(2):165-76.
Further
evidence for elevated human minisatellite mutation rate in Belarus eight years
after the Chernobyl accident.
Mutat Res. 1997 Nov 28;381(2):267-78.
Molecular-cytogenetic
detection of a deletion of 1p36.3.
J Med Genet. 1997 Apr;34(4):314-7.
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Cox SA, Attwood J, Bryant SP, Bains
R, Povey S, Rebello M, Kapsetaki M, Moschonas NK, Grzeschik KH, Otto M, Dixon
M, Sudworth HE, Kooy RF, Wright A, Teague P, Terrenato L, Vergnaud G,
Monfouilloux S, Weissenbach J, Alibert O, Dib C, Faure S, Bakker E, Pearson
NM, Spurr NK, et al.
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European
Gene Mapping Project (EUROGEM): breakpoint panels for human chromosomes based
on the CEPH reference families. Centre d'Etude du Polymorphisme Humain.
Ann Hum Genet. 1996 Nov;60 ( Pt 6):447-86.
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Caron H, van Sluis P, Buschman R,
Pereira do Tanque R, Maes P, Beks L, de Kraker J, Voute PA, Vergnaud G,
Westerveld A, Slater R, Versteeg R.
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Allelic loss
of the short arm of chromosome 4 in neuroblastoma suggests a novel tumour
suppressor gene locus.
Hum Genet. 1996 Jun;97(6):834-7.
Stability of
microsatellites and minisatellites in Bloom syndrome, a human syndrome of
genetic instability.
Mutat Res. 1996 Apr
2;362(3):227-36.
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Pravenec
M, Gauguier D, Schott JJ, Buard J, Kren V, Bila V, Szpirer C, Szpirer J, Wang
JM, Huang H, St Lezin E, Spence MA, Flodman P, Printz M, Lathrop GM, Vergnaud
G, Kurtz TW.
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A genetic
linkage map of the rat derived from recombinant inbred strains.
Mamm Genome. 1996 Feb;7(2):117-27.
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Schott JJ, Charpentier F, Peltier S,
Foley P, Drouin E, Bouhour JB, Donnelly P, Vergnaud G, Bachner L, Moisan JP,
et al.
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Mapping of a
gene for long QT syndrome to chromosome 4q25-27.
Am J Hum Genet. 1995 Nov;57(5):1114-22.
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Kozman HM, Keith TP, Donis-Keller H,
White RL, Weissenbach J, Dean M, Vergnaud G, Kidd K, Gusella J, Royle NJ, et
al.
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The CEPH
consortium linkage map of human chromosome 16.
Genomics. 1995 Jan 1;25(1):44-58.
No increase
in female recombination frequency in the distal part of the human
pseudoautosomal region.
Genomics. 1994 Dec;24(3):610-2.
Complex
recombination events at the hypermutable minisatellite CEB1 (D2S90).
EMBO J. 1994 Jul 1;13(13):3203-10.
The EUROGEM
map of human chromosome 22.
Eur J Hum Genet. 1994;2(3):246-7.
The EUROGEM
map of human chromosome 20.
Eur J Hum Genet. 1994;2(3):242-3.
The EUROGEM
map of human chromosome 19.
Eur J Hum Genet. 1994;2(3):240-1.
The EUROGEM
map of human chromosome 17.
Eur J Hum Genet. 1994;2(3):236-7.
The EUROGEM
map of human chromosome 16.
Eur J Hum Genet. 1994;2(3):234-5.
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Joyce C, Fanning L, Malcolm S, Richard
I, Broux O, Beckmann JS, Flint T, Kruse TA, Vergnaud G, Cox SA, et al.
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The EUROGEM
map of human chromosome 15.
Eur J Hum Genet. 1994;2(3):232-3.
The EUROGEM
map of human chromosome 14.
Eur J Hum Genet. 1994;2(3):230-1
The EUROGEM
map of human chromosome 13.
Eur J Hum Genet. 1994;2(3):228-9.
The EUROGEM
map of human chromosome 12.
Eur J Hum Genet. 1994;2(3):226-7.
The EUROGEM
map of human chromosome 11.
Eur J Hum Genet. 1994;2(3):224-5.
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Kapsetaki M, Kokkinaki M, Angelicheva D,
Lubyova B, Mavraki H, Argyrokastritis A, Vergnaud G, Ferguson-Smith M,
Rubinsztein DC, Lush M, et al.
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The EUROGEM
map of human chromosome 10.
Eur J Hum Genet. 1994;2(3):222-3.
The EUROGEM
map of human chromosome 9.
Eur J Hum Genet. 1994;2(3):220-1.
The EUROGEM
map of human chromosome 8.
Eur J Hum Genet. 1994;2(3):218-9.
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Badbanchi F, Otto M, Kohlhauer U,
Grzeschik N, Beck S, Smith SJ, Swallow DM, Kooy RF, Vergnaud G, Aldred M, et
al.
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The EUROGEM
map of human chromosome 7.
Eur J Hum Genet. 1994;2(3):216-7.
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Terrenato L, Jodice C, Blasi P, Loizedda
A, Contu L, Buard J, Vergnaud G, Humphries P, Kumar-Singh R, Massart C, et
al.
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The EUROGEM
map of human chromosome 6.
Eur J Hum Genet. 1994;2(3):214-5.
The EUROGEM
map of human chromosome 4.
Eur J Hum Genet. 1994;2(3):210-1.
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Schurmann M, Muller B, Duvigneau C,
Leutelt J, Krey S, Kumar-Singh R, Lush M, Swallow DM, Vergnaud G, Bakker E, et
al.
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The EUROGEM
map of human chromosome 3.
Eur J Hum Genet. 1994;2(3):208-9.
The EUROGEM
map of human chromosome 2.
Eur J Hum Genet. 1994;2(3):206-7.
The EUROGEM
map of human chromosome 1.
Eur J Hum Genet. 1994;2(3):204-5.
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Bowcock AM, Gerken SC, Barnes RI, Shiang
R, Jabs EW, Warren AC, Antonarakis S, Retief AE, Vergnaud G, Leppert M, et
al.
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The CEPH consortium
linkage map of human chromosome 13.
Genomics. 1993 May;16(2):486-96.
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Gurrieri F, Trask BJ, van den Engh
G, Krauss CM, Schinzel A, Pettenati MJ, Schindler D, Dietz-Band J, Vergnaud
G, Scherer SW, et al.
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Physical
mapping of the holoprosencephaly critical region on chromosome 7q36.
Nat Genet. 1993 Mar;3(3):247-51.
Detection, cloning, and distribution of minisatellites in some mammalian
genomes.
EXS. 1993;67:47-57.
Genetic
mapping through the use of synthetic tandem repeats in the mouse genome.
Mamm Genome. 1993;4(3):135-40.
PCR assay
for chromosome 1p deletion in small neuroblastoma samples.
Int J Cancer. 1992 Oct 21;52(4):544-8.
Isolation of
human minisatellite loci detected by synthetic tandem repeat probes: direct
comparison with cloned DNA fingerprinting probes.
Hum Mol Genet. 1992 Aug;1(5):319-23.
Genetic
mapping of three human homologues of murine t-complex genes localizes TCP10 to
6q27, 15 cM distal to TCP1 and PLG.
Genomics. 1992 Apr;12(4):826-8.
CEB 13
detects a VNTR locus (Het: 93%) on chromosome 7q.
Hum Mol Genet. 1992 Apr;1(1):64.
CEB 29
detects a VNTR locus (Het: 80%) on chromosome XY.
Hum Mol Genet. 1992 Apr;1(1):63.
CEB 15
detects a VNTR locus (Het: 92%) on chromosome 1p.
Hum Mol Genet. 1992
Apr;1(1):63.
Detection of
polymorphic loci in complex genomes with synthetic tandem repeats.
Genomics. 1992
Mar;12(3):454-8.
Modulation
of polymorphic loci detection with synthetic tandem repeat variants.
Mamm Genome. 1992;3(10):546-9.
Report of
the second international workshop on human chromosome 5 mapping: consensus
genetic map.
Cytogenet Cell Genet. 1992;61(4):237-42.
The use of
synthetic tandem repeats to isolate new VNTR loci: cloning of a human
hypermutable sequence.
Genomics. 1991 Sep;11(1):135-44.
A VNTR
isolated by size selection of human DNA fragments detects RFLPs at the
extremity of 1p and 4q.
Nucleic Acids Res. 1991 Aug 25;19(16):4572.
A synthetic
probe STR 14C19, detects a new polymorphic locus at 16pter (D16S282).
Nucleic Acids Res. 1991 Jul 25;19(14):4015.
A synthetic
probe, STR 16C17, detects a new polymorphic locus at 17pter (D17S450).
Nucleic Acids Res. 1991 Jul 25;19(14):4014.
A synthetic
probe, STR 14C13, detects a new polymorphic locus on chromosome arm 7q
(D7S450).
Nucleic Acids Res. 1991 Jul 25;19(14):4014.
A synthetic
probe, STR 16C2, detects a new polymorphic locus at 5pter (D5S206).
Nucleic Acids Res. 1991 Jul 25;19(14):4013.
A synthetic
probe, STR 16C18, detects a new polymorphic locus at 12qter (D12S55).
Nucleic Acids Res. 1991 Jul 25;19(14):4013.
Detection of
single and multiple polymorphic loci by synthetic tandem repeats of short
oligonucleotides.
Electrophoresis. 1991 Feb-Mar;12(2-3):134-40.
Polymers of
random short oligonucleotides detect polymorphic loci in the human genome.
Nucleic Acids Res. 1989 Oct 11;17(19):7623-30.
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